Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11548 and 11549 are separated by 332 nucleotides11549 and 11550 are separated by 476 nucleotides11550 and 11551 are separated by 231 nucleotides11551 and 11552 are separated by 956 nucleotides mRNA_3180: 11548 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209, at 29,208 to 30,655 11548 mRNA_3181: 11549 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 30,988 to 32,695 11549 mRNA_3182: 11550 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 33,172 to 34,723 11550 mRNA_3183: 11551 - HMMPfam-Cohesin loading factor-PF10345, at 34,955 to 37,755 11551 mRNA_3184: 11552 - K13220 WBP4, FBP21 WW domain-binding protein 4, at 38,712 to 39,951 11552
Group Condition mRNA_3180 mRNA_3181 mRNA_3182 mRNA_3183 mRNA_3184
11548 11549 11550 11551 11552
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.0 -0.5 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.1 -0.2 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 +0.0 N.D. N.D.
growth on oleic acid YNB Glucose -0.0 +0.1 -0.1 N.D. N.D.
growth on ypd YPD -0.0 -0.1 +0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 -0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 +0.0 N.D. N.D.
auxotrophy YNB Glucose -0.0 -0.0 +0.2 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.4 +0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.5 -0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.3 +0.2 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.2 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.0 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.4 +0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.3 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.2 +0.2 N.D. N.D.
auxotrophy Dropout Complete +0.2 +0.5 +0.1 N.D. N.D.
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