Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11553 and 11554 are separated by 92 nucleotides11554 and 11555 are separated by 444 nucleotides11555 and 11556 are separated by 271 nucleotides11556 and 11557 are separated by 829 nucleotides mRNA_3185: 11553 - KOG1577 Aldo/keto reductase family proteins, at 40,241 to 41,550 11553 mRNA_3186: 11554 - KOG4444 Peroxisomal assembly protein PEX3, at 41,643 to 43,993 11554 mRNA_3187: 11555 - BLAST Protein disulfide-isomerase erp38 [Hypsizygus marmoreus], at 44,438 to 45,168 11555 mRNA_3188: 11556 - Hypothetical Protein, at 45,440 to 45,769 11556 mRNA_3189: 11557 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 46,599 to 47,566 11557
Group Condition mRNA_3185 mRNA_3186 mRNA_3187 mRNA_3188 mRNA_3189
11553 11554 11555 11556 11557
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. -0.7 -1.4 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.8 -0.1 -0.6
auxotrophy Dropout Complete +0.2 N.D. -0.6 -0.7 +0.0
growth on oleic acid YNB Oleic Acid -0.3 N.D. -0.5 -0.1 -0.1
growth on oleic acid YNB Glucose -0.1 N.D. -0.2 -0.5 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -0.1 -0.5 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.0 -0.5 +0.0
auxotrophy YNB Glucose +0.2 N.D. -0.1 -0.5 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -1.0 -0.1 +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.6 -0.8 -0.1
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.1 -0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.2 -0.4 -0.2
growth on ypd YPD +0.0 N.D. -0.6 +0.6 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.1 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.4 -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. +0.5 -0.4 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.2 -0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.1 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. -0.2 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. +0.6 -0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.4 +0.1 +0.3
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