Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11554 and 11555 are separated by 444 nucleotides11555 and 11556 are separated by 271 nucleotides11556 and 11557 are separated by 829 nucleotides11557 and 11558 are separated by 407 nucleotides mRNA_3186: 11554 - KOG4444 Peroxisomal assembly protein PEX3, at 41,643 to 43,993 11554 mRNA_3187: 11555 - BLAST Protein disulfide-isomerase erp38 [Hypsizygus marmoreus], at 44,438 to 45,168 11555 mRNA_3188: 11556 - Hypothetical Protein, at 45,440 to 45,769 11556 mRNA_3189: 11557 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 46,599 to 47,566 11557 mRNA_3190: 11558 - KOG2427 Uncharacterized conserved protein, at 47,974 to 50,099 11558
Group Condition mRNA_3186 mRNA_3187 mRNA_3188 mRNA_3189 mRNA_3190
11554 11555 11556 11557 11558
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.7 -1.4 -0.0 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.8 -0.1 -0.6 -0.2
auxotrophy Dropout Complete N.D. -0.6 -0.7 +0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -1.0 -0.1 +0.5 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.5 -0.2 -0.2
auxotrophy YNB Glucose N.D. -0.1 -0.5 -0.1 -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.5 -0.1 -0.1 +0.1
growth on oleic acid YNB Glucose N.D. -0.2 -0.5 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.6 -0.8 -0.1 -0.0
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.5 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.3 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.5 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 -0.4 -0.2 +0.2
growth on ypd YPD N.D. -0.6 +0.6 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.1 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.4 -0.3 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.2 -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.1 +0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.5 -0.4 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.6 -0.2 +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 +0.1 +0.3 +0.0
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