Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11558 and 11559 are separated by 110 nucleotides11559 and 11560 are separated by 400 nucleotides11560 and 11561 are separated by 270 nucleotides11561 and 11562 are separated by 1829 nucleotides mRNA_3190: 11558 - KOG2427 Uncharacterized conserved protein, at 47,974 to 50,099 11558 mRNA_3191: 11559 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 50,210 to 52,668 11559 mRNA_3192: 11560 - HMMPfam-Hypothetical protein FLILHELTA-PF10306, at 53,069 to 53,726 11560 mRNA_3193: 11561 - K13116 DDX41, ABS ATP-dependent RNA helicase DDX41, at 53,997 to 56,662 11561 mRNA_3194: 11562 - Hypothetical Protein, at 58,492 to 59,376 11562
Group Condition mRNA_3190 mRNA_3191 mRNA_3192 mRNA_3193 mRNA_3194
11558 11559 11560 11561 11562
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.2 -0.1 N.D. -1.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.2 +0.3 N.D. -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.1 -0.7 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.4 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 -0.0 N.D. -0.3
auxotrophy YNB Glucose -0.1 +0.3 -0.0 N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -0.0 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 +0.1 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.0 -0.6 N.D. +0.6
auxotrophy Dropout Complete -0.2 -0.1 +0.3 N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.4 +0.1 N.D. +0.2
growth on oleic acid YNB Glucose +0.1 -0.1 -0.2 N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.1 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.1 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.4 +0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.3 -0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.0 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.1 -0.3 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 -0.3 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 +0.1 N.D. +0.0
growth on ypd YPD +0.1 +0.1 +1.1 N.D. +0.3
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