Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11559 and 11560 are separated by 400 nucleotides11560 and 11561 are separated by 270 nucleotides11561 and 11562 are separated by 1829 nucleotides11562 and 11563 are separated by 1246 nucleotides mRNA_3191: 11559 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 50,210 to 52,668 11559 mRNA_3192: 11560 - HMMPfam-Hypothetical protein FLILHELTA-PF10306, at 53,069 to 53,726 11560 mRNA_3193: 11561 - K13116 DDX41, ABS ATP-dependent RNA helicase DDX41, at 53,997 to 56,662 11561 mRNA_3194: 11562 - Hypothetical Protein, at 58,492 to 59,376 11562 mRNA_3195: 11563 - Hypothetical Protein, at 60,623 to 61,680 11563
Group Condition mRNA_3191 mRNA_3192 mRNA_3193 mRNA_3194 mRNA_3195
11559 11560 11561 11562 11563
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 N.D. -1.7 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.6 N.D. +0.6 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.0 N.D. -0.3 -0.3
growth on oleic acid YNB Oleic Acid -0.1 -0.4 N.D. +0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.7 N.D. +0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 N.D. -0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 N.D. -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 N.D. -0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.1 N.D. -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.3 N.D. -0.6 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 N.D. +0.1 +0.0
growth on oleic acid YNB Glucose -0.1 -0.2 N.D. +0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 N.D. +0.3 +0.1
auxotrophy YNB Glucose +0.3 -0.0 N.D. -0.3 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.1 N.D. +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.0 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.3 N.D. +0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.1 N.D. -0.1 +0.2
auxotrophy Dropout Complete -0.1 +0.3 N.D. -0.0 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 N.D. +0.0 +0.8
growth on ypd YPD +0.1 +1.1 N.D. +0.3 +0.1
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