Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11560 and 11561 are separated by 270 nucleotides11561 and 11562 are separated by 1829 nucleotides11562 and 11563 are separated by 1246 nucleotides11563 and 11564 are separated by 426 nucleotides mRNA_3192: 11560 - HMMPfam-Hypothetical protein FLILHELTA-PF10306, at 53,069 to 53,726 11560 mRNA_3193: 11561 - K13116 DDX41, ABS ATP-dependent RNA helicase DDX41, at 53,997 to 56,662 11561 mRNA_3194: 11562 - Hypothetical Protein, at 58,492 to 59,376 11562 mRNA_3195: 11563 - Hypothetical Protein, at 60,623 to 61,680 11563 mRNA_3196: 11564 - Hypothetical Protein, at 62,107 to 63,896 11564
Group Condition mRNA_3192 mRNA_3193 mRNA_3194 mRNA_3195 mRNA_3196
11560 11561 11562 11563 11564
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -1.7 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.3 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. +0.6 -0.7 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. -0.6 +0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. -0.3 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.2 -0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.4 N.D. +0.0 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.0 -0.1
growth on ricinoleic acid YNB Glucose +0.1 N.D. -0.2 -0.1 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 N.D. +0.1 +0.3 +0.4
auxotrophy YNB Glucose -0.0 N.D. -0.3 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. +0.3 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.1 +0.2 +0.1
growth on oleic acid YNB Glucose -0.2 N.D. +0.2 +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.1 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. +0.3 +0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.2 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.0 +0.8 -0.2
auxotrophy Dropout Complete +0.3 N.D. -0.0 +0.6 -0.1
growth on ypd YPD +1.1 N.D. +0.3 +0.1 +0.4
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