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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11569 and 11570 are separated by 476 nucleotides
11570 and 11571 are separated by 142 nucleotides
11571 and 11572 are separated by 256 nucleotides
11572 and 11573 are separated by 220 nucleotides
mRNA_3201: 11569 - K12175 GPS1, COPS1, CSN1 COP9 signalosome complex subunit 1, at 77,177 to 79,098
11569
mRNA_3202: 11570 - KOG2533 Permease of the major facilitator superfamily, at 79,575 to 81,413
11570
mRNA_3203: 11571 - Hypothetical Protein, at 81,556 to 81,888
11571
mRNA_3204: 11572 - SUPERFAMILY--SSF69118, at 82,145 to 83,066
11572
mRNA_3205: 11573 - K13281 uvsE, UVE1 UV DNA damage endonuclease, at 83,287 to 85,713
11573
Group
Condition
mRNA
_3201
mRNA
_3202
mRNA
_3203
mRNA
_3204
mRNA
_3205
11569
11570
11571
11572
11573
facs on lipid accumulation
Sorted High BODIPY Gate
-1.4
+0.2
+0.2
-0.9
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.2
-0.7
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-1.3
-0.0
+0.5
-0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
+0.2
-0.5
-0.4
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.6
-1.3
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
+0.3
+0.4
+0.3
-0.1
growth on oleic acid
YNB Glucose
+0.1
-0.2
+0.2
-0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
+0.9
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.3
-0.1
+0.7
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.0
+0.4
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.4
+0.0
+0.6
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
+0.4
+0.5
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
-0.2
+1.0
+0.1
-0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
+0.6
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
+0.3
-0.4
+0.7
+0.1
growth on ypd
YPD
+0.1
-0.3
+0.9
+0.8
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.9
-0.3
+1.2
-0.3
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.1
+1.7
+0.5
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.1
+2.0
+0.5
+0.0
auxotrophy
YNB Glucose
+0.1
-0.0
+2.2
+0.7
-0.1
auxotrophy
Dropout Complete
+1.0
+0.2
+2.3
+0.6
+0.1
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