Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11570 and 11571 are separated by 142 nucleotides11571 and 11572 are separated by 256 nucleotides11572 and 11573 are separated by 220 nucleotides11573 and 11574 are separated by 220 nucleotides mRNA_3202: 11570 - KOG2533 Permease of the major facilitator superfamily, at 79,575 to 81,413 11570 mRNA_3203: 11571 - Hypothetical Protein, at 81,556 to 81,888 11571 mRNA_3204: 11572 - SUPERFAMILY--SSF69118, at 82,145 to 83,066 11572 mRNA_3205: 11573 - K13281 uvsE, UVE1 UV DNA damage endonuclease, at 83,287 to 85,713 11573 mRNA_3206: 11574 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 85,934 to 91,274 11574
Group Condition mRNA_3202 mRNA_3203 mRNA_3204 mRNA_3205 mRNA_3206
11570 11571 11572 11573 11574
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.7 +0.2 -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.5 -0.4 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -1.3 +0.2 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 -0.9 -0.2 +0.3
growth on oleic acid YNB Glucose -0.2 +0.2 -0.1 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +1.0 +0.1 -0.5 -0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.9 -0.0 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.4 +0.7 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.5 -0.2 +0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.4 +0.3 +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +1.2 -0.3 +0.4 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 +0.7 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.4 +0.3 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.6 +0.3 +0.2 -0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.4 +0.5 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.0 +0.6 +0.1 +0.1
growth on ypd YPD -0.3 +0.9 +0.8 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 +1.7 +0.5 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +2.0 +0.5 +0.0 -0.1
auxotrophy YNB Glucose -0.0 +2.2 +0.7 -0.1 -0.1
auxotrophy Dropout Complete +0.2 +2.3 +0.6 +0.1 -0.2
remove
mRNA_3202
plot
remove
mRNA_3203
plot
remove
mRNA_3204
remove
mRNA_3205
plot
remove
mRNA_3206
plot