Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11571 and 11572 are separated by 256 nucleotides11572 and 11573 are separated by 220 nucleotides11573 and 11574 are separated by 220 nucleotides11574 and 11575 are separated by 287 nucleotides mRNA_3203: 11571 - Hypothetical Protein, at 81,556 to 81,888 11571 mRNA_3204: 11572 - SUPERFAMILY--SSF69118, at 82,145 to 83,066 11572 mRNA_3205: 11573 - K13281 uvsE, UVE1 UV DNA damage endonuclease, at 83,287 to 85,713 11573 mRNA_3206: 11574 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 85,934 to 91,274 11574 mRNA_3207: 11575 - Hypothetical Protein, at 91,562 to 92,218 11575
Group Condition mRNA_3203 mRNA_3204 mRNA_3205 mRNA_3206 mRNA_3207
11571 11572 11573 11574 11575
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.3 +0.2 +0.1 -0.0 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 +0.2 -0.0 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.4 +0.2 -0.1 +0.3
growth on oleic acid YNB Glucose +0.2 -0.1 +0.1 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.9 -0.2 +0.3 +0.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.3 -0.1 -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +1.0 +0.1 -0.5 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.7 -0.1 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.7 +0.1 -0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.9 -0.0 -0.3 -0.0 +0.1
growth on ricinoleic acid YNB Glucose +0.4 +0.5 -0.1 +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.2 +0.1 +0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.3 +0.2 -0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +1.2 -0.3 +0.4 -0.4 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.6 +0.1 +0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.6 +0.3 +0.2 -0.1 +0.1
growth on ypd YPD +0.9 +0.8 +0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +1.7 +0.5 -0.1 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +2.0 +0.5 +0.0 -0.1 +0.2
auxotrophy YNB Glucose +2.2 +0.7 -0.1 -0.1 +0.0
auxotrophy Dropout Complete +2.3 +0.6 +0.1 -0.2 +0.3
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