Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11580 and 11581 are separated by 262 nucleotides11581 and 11582 are separated by 398 nucleotides11582 and 11583 are separated by 196 nucleotides11583 and 11584 are separated by 460 nucleotides mRNA_3212: 11580 - BLAST related to TRX2-thioredoxin II [Melanopsichium pennsy..., at 104,334 to 106,276 11580 mRNA_3213: 11581 - HMMPfam-Tubulin domain-PF14881,SUPERFAMILY--SSF52490, at 106,539 to 109,229 11581 mRNA_3214: 11582 - KOG3989 Beta-2-glycoprotein I, at 109,628 to 110,560 11582 mRNA_3215: 11583 - K17103 CHO1, pssA CDP-diacylglycerol---serine O-phosphatidyltransferase, at 110,757 to 112,157 11583 mRNA_3216: 11584 - K12881 THOC4, ALY THO complex subunit 4, at 112,618 to 114,116 11584
Group Condition mRNA_3212 mRNA_3213 mRNA_3214 mRNA_3215 mRNA_3216
11580 11581 11582 11583 11584
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -1.9 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.6 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.8 N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. -0.7 N.D. -0.8
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.6 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -0.5 N.D. -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.1 N.D. -0.8
auxotrophy Dropout Complete +0.2 N.D. -0.4 N.D. -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.5 N.D. -1.0
auxotrophy YNB Glucose +0.3 N.D. -0.0 N.D. -0.8
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.4 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. +0.4 N.D. -1.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.5 N.D. -1.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. -0.2 N.D. -0.5
growth on oleic acid YNB Glucose -0.0 N.D. +0.6 N.D. -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +0.5 N.D. -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. -0.7 N.D. +1.1
growth on ypd YPD -0.2 N.D. -0.2 N.D. +0.6
growth on ricinoleic acid YNB Glucose +0.3 N.D. -0.1 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +1.1 N.D. -0.7
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.7 N.D. +0.2
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