Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11582 and 11583 are separated by 196 nucleotides11583 and 11584 are separated by 460 nucleotides11584 and 11585 are separated by 2529 nucleotides11585 and 11586 are separated by 1940 nucleotides mRNA_3214: 11582 - KOG3989 Beta-2-glycoprotein I, at 109,628 to 110,560 11582 mRNA_3215: 11583 - K17103 CHO1, pssA CDP-diacylglycerol---serine O-phosphatidyltransferase, at 110,757 to 112,157 11583 mRNA_3216: 11584 - K12881 THOC4, ALY THO complex subunit 4, at 112,618 to 114,116 11584 mRNA_3217: 11585 - Hypothetical Protein, at 116,646 to 116,855 11585 mRNA_3218: 11586 - PRINTS-Proline rich extensin signature-PR01217, at 118,796 to 120,170 11586
Group Condition mRNA_3214 mRNA_3215 mRNA_3216 mRNA_3217 mRNA_3218
11582 11583 11584 11585 11586
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.9 N.D. -0.3 N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 N.D. -0.8 N.D. -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 N.D. -0.4 N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 N.D. -0.7 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 N.D. -0.6 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine -0.6 N.D. -0.4 N.D. +0.1
auxotrophy Dropout Complete -0.4 N.D. -0.6 N.D. +0.2
growth on oleic acid YNB Oleic Acid -0.4 N.D. -0.2 N.D. -0.1
auxotrophy YNB Glucose -0.0 N.D. -0.8 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -1.1 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. -0.5 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. -0.8 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.5 N.D. -1.0 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.5 N.D. -1.0 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. -0.8 N.D. -0.1
growth on oleic acid YNB Glucose +0.6 N.D. -0.7 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.0 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 N.D. +1.1 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy +1.1 N.D. -0.7 N.D. -0.1
growth on ypd YPD -0.2 N.D. +0.6 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.7 N.D. +0.2 N.D. -0.0
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