Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11585 and 11586 are separated by 1940 nucleotides11586 and 11587 are separated by 5406 nucleotides11587 and 11588 are separated by 192 nucleotides11588 and 11589 are separated by 1290 nucleotides mRNA_3217: 11585 - Hypothetical Protein, at 116,646 to 116,855 11585 mRNA_3218: 11586 - PRINTS-Proline rich extensin signature-PR01217, at 118,796 to 120,170 11586 mRNA_3219: 11587 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 125,577 to 131,824 11587 mRNA_3220: 11588 - KOG0686 COP9 signalosome, subunit CSN1, at 132,017 to 133,130 11588 mRNA_3221: 11589 - KOG2533 Permease of the major facilitator superfamily, at 134,421 to 136,280 11589
Group Condition mRNA_3217 mRNA_3218 mRNA_3219 mRNA_3220 mRNA_3221
11585 11586 11587 11588 11589
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 +0.0 -0.4 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.1 -0.9 -0.2
auxotrophy YNB Glucose N.D. +0.1 +0.0 -0.7 -0.4
growth on ricinoleic acid YNB Glucose N.D. -0.0 +0.1 -0.9 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.6 -0.0 +0.6 -0.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 +0.0 -0.9 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.1 -0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.1 -0.1 -0.3
auxotrophy Dropout Complete N.D. +0.2 -0.0 -0.1 -0.5
growth on oleic acid YNB Glucose N.D. -0.1 +0.0 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.4 +0.1 +0.3 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 +0.1 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.0 -0.2 -0.3
growth on ypd YPD N.D. +0.1 +0.1 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 +0.1 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.1 +0.2 -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.1 +0.0 +0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.1 +0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 +0.0 +0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 +0.1 +0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.0 +0.3 +0.2
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