Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11593 and 11594 are separated by 232 nucleotides
11594 and 11595 are separated by 1035 nucleotides
11595 and 11596 are separated by 421 nucleotides
11596 and 11597 are separated by 229 nucleotides
mRNA_3225: 11593 - KOG0951 RNA helicase BRR2, DEAD-box superfamily, at 139,733 to 140,179
11593
mRNA_3226: 11594 - K05535 MNN2 alpha 1,2-mannosyltransferase, at 140,412 to 142,107
11594
mRNA_3227: 11595 - K12854 SNRNP200, BRR2 pre-mRNA-splicing helicase BRR2, at 143,143 to 150,132
11595
mRNA_3228: 11596 - Hypothetical Protein, at 150,554 to 152,280
11596
mRNA_3229: 11597 - K01113 phoD alkaline phosphatase D, at 152,510 to 154,539
11597
Group
Condition
mRNA
_3225
mRNA
_3226
mRNA
_3227
mRNA
_3228
mRNA
_3229
11593
11594
11595
11596
11597
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.7
N.D.
-0.0
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.3
N.D.
-0.1
-0.2
auxotrophy
Dropout Complete
-0.6
-0.0
N.D.
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.0
N.D.
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.0
N.D.
-0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.0
-0.3
N.D.
-0.1
+0.1
growth on oleic acid
YNB Glucose
+0.1
-0.2
N.D.
-0.0
-0.2
auxotrophy
YNB Glucose
-0.3
+0.0
N.D.
+0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
N.D.
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.1
N.D.
+0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.1
N.D.
+0.2
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
N.D.
-0.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.2
N.D.
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.1
N.D.
+0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
N.D.
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.2
N.D.
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.1
N.D.
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
-0.2
N.D.
+0.3
-0.3
growth on ricinoleic acid
YNB Glucose
-0.5
+0.5
N.D.
+0.1
+0.3
growth on ypd
YPD
+0.6
+0.0
N.D.
+0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.1
N.D.
+0.3
+0.4
remove
mRNA_3225
plot
remove
mRNA_3226
plot
remove
mRNA_3227
remove
mRNA_3228
plot
remove
mRNA_3229
plot