Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11598 and 11599 are separated by 42 nucleotides11599 and 11600 are separated by 315 nucleotides11600 and 11601 are separated by 423 nucleotides11601 and 11602 are separated by 181 nucleotides mRNA_3230: 11598 - HMMPfam-Region of unknown function (DUF2417)-PF10329, at 155,480 to 157,759 11598 mRNA_3231: 11599 - KOG1430 C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases, at 157,802 to 159,637 11599 mRNA_3232: 11600 - ProSiteProfiles-BRCT domain profile.-PS50172, at 159,953 to 161,045 11600 mRNA_3233: 11601 - KOG1339 Aspartyl protease, at 161,469 to 163,797 11601 mRNA_3234: 11602 - Hypothetical Protein, at 163,979 to 166,240 11602
Group Condition mRNA_3230 mRNA_3231 mRNA_3232 mRNA_3233 mRNA_3234
11598 11599 11600 11601 11602
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.1 -1.0 -0.9 -0.0
auxotrophy Dropout Complete -0.3 -0.1 -0.8 -0.0 -0.5
growth on oleic acid YNB Glucose -0.0 +0.1 -1.3 +0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 -0.5 -0.0 -0.3
growth on oleic acid YNB Oleic Acid +0.1 +0.0 -0.4 +0.1 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.3 -0.9 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.4 +0.6 -0.6 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 -0.2 -0.2 -0.9
auxotrophy YNB Glucose -0.2 -0.0 -0.3 +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.2 +0.6 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.3 +0.5 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.3 +1.4 +0.1 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.2 +1.6 -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5 +1.5 +0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.3 +0.7 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 +1.2 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.3 +1.8 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.2 +1.8 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 +1.5 -0.1 +0.0
growth on ypd YPD +0.3 -0.3 +1.8 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.3 +1.4 -0.2 +0.1
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