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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11600 and 11601 are separated by 423 nucleotides
11601 and 11602 are separated by 181 nucleotides
11602 and 11603 are separated by 4037 nucleotides
11603 and 11604 are separated by 240 nucleotides
mRNA_3232: 11600 - ProSiteProfiles-BRCT domain profile.-PS50172, at 159,953 to 161,045
11600
mRNA_3233: 11601 - KOG1339 Aspartyl protease, at 161,469 to 163,797
11601
mRNA_3234: 11602 - Hypothetical Protein, at 163,979 to 166,240
11602
mRNA_3235: 11603 - Hypothetical Protein, at 170,278 to 173,457
11603
mRNA_3236: 11604 - K01755 argH, ASL argininosuccinate lyase, at 173,698 to 175,795
11604
Group
Condition
mRNA
_3232
mRNA
_3233
mRNA
_3234
mRNA
_3235
mRNA
_3236
11600
11601
11602
11603
11604
growth on oleic acid
YNB Glucose
-1.3
+0.0
-0.4
+0.2
-5.9
facs on lipid accumulation
Sorted No BODIPY Gate
+0.6
-0.1
-0.5
-0.3
-6.3
auxotrophy
YNB Glucose
-0.3
+0.1
-0.0
-0.0
-5.9
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.0
-0.3
-0.1
-4.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
-0.1
-0.1
-0.1
-5.9
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.4
+0.1
-0.7
-0.2
-5.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.2
+0.1
+0.1
-0.2
-6.0
growth on oleic acid
YNB Oleic Acid
-0.4
+0.1
-0.8
-0.2
-3.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.9
+0.1
-3.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.5
+0.3
-0.3
-0.2
-5.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.6
-0.4
-0.2
-0.1
-3.6
growth on ricinoleic acid
YNB Glucose
+1.8
+0.1
+0.1
-0.1
-4.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.8
-0.1
-0.1
-0.3
-3.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
-0.6
-0.4
+0.2
-1.9
auxotrophy
Dropout Complete
-0.8
-0.0
-0.5
+0.0
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-0.9
-0.0
+0.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.9
-0.1
-0.1
-0.1
-0.4
ypd buoyancy
40 hrs High Buoyancy
+0.7
-0.1
+0.2
+0.1
+0.3
growth on ypd
YPD
+1.8
-0.1
+0.1
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+1.4
-0.2
+0.1
+0.0
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+1.5
-0.1
+0.0
+0.1
+0.5
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