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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11602 and 11603 are separated by 4037 nucleotides
11603 and 11604 are separated by 240 nucleotides
11604 and 11605 are separated by 692 nucleotides
11605 and 11606 are separated by 135 nucleotides
mRNA_3234: 11602 - Hypothetical Protein, at 163,979 to 166,240
11602
mRNA_3235: 11603 - Hypothetical Protein, at 170,278 to 173,457
11603
mRNA_3236: 11604 - K01755 argH, ASL argininosuccinate lyase, at 173,698 to 175,795
11604
mRNA_3237: 11605 - K10357 MYO5 myosin V, at 176,488 to 184,590
11605
mRNA_3238: 11606 - BLAST RNA replication protein [Rhizoctonia solani], at 184,726 to 188,428
11606
Group
Condition
mRNA
_3234
mRNA
_3235
mRNA
_3236
mRNA
_3237
mRNA
_3238
11602
11603
11604
11605
11606
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.3
-6.3
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.2
-6.0
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
-5.9
+0.1
-0.1
growth on oleic acid
YNB Glucose
-0.4
+0.2
-5.9
+0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
-0.2
-5.6
+0.6
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.2
-5.7
+0.6
-0.0
auxotrophy
YNB Glucose
-0.0
-0.0
-5.9
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.1
-4.9
+0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
+0.1
-3.5
-0.6
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
-4.2
+0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.8
-0.2
-3.3
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.1
-3.6
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
-3.4
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.2
-1.9
+0.2
+0.0
auxotrophy
Dropout Complete
-0.5
+0.0
-0.4
+0.2
+0.1
growth on ypd
YPD
+0.1
-0.3
-0.2
-0.0
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.4
+0.0
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.2
+0.0
-0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.0
+0.1
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.1
+0.3
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.1
+0.5
+0.1
-0.0
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