Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11607 and 11608 are separated by 1290 nucleotides11608 and 11609 are separated by 466 nucleotides11609 and 11610 are separated by 114 nucleotides11610 and 11611 are separated by 385 nucleotides mRNA_3239: 11607 - K15425 PPP4R2 serine/threonine-protein phosphatase 4 regulatory subunit 2, at 188,570 to 189,872 11607 mRNA_3240: 11608 - Hypothetical Protein, at 191,163 to 192,030 11608 mRNA_3241: 11609 - SUPERFAMILY--SSF52047, at 192,497 to 194,768 11609 mRNA_3242: 11610 - K01814 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, at 194,883 to 196,226 11610 mRNA_3243: 11611 - K10752 RBBP4, HAT2, CAF1, MIS16 histone-binding protein RBBP4, at 196,612 to 198,456 11611
Group Condition mRNA_3239 mRNA_3240 mRNA_3241 mRNA_3242 mRNA_3243
11607 11608 11609 11610 11611
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.2 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.0 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.3 -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.0 -0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.2 +0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.0 -0.2 N.D. N.D.
growth on oleic acid YNB Glucose -0.2 +0.0 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.3 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 -0.1 N.D. N.D.
growth on ypd YPD +0.1 +0.2 -0.1 N.D. N.D.
auxotrophy Dropout Complete +0.4 +0.1 -0.2 N.D. N.D.
auxotrophy YNB Glucose +0.3 +0.4 -0.2 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.2 +0.3 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.3 +0.2 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +1.2 +0.0 -0.1 N.D. N.D.
remove
mRNA_3239
plot
remove
mRNA_3240
plot
remove
mRNA_3241
remove
mRNA_3242
plot
remove
mRNA_3243
plot