Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11608 and 11609 are separated by 466 nucleotides11609 and 11610 are separated by 114 nucleotides11610 and 11611 are separated by 385 nucleotides11611 and 11612 are separated by 849 nucleotides mRNA_3240: 11608 - Hypothetical Protein, at 191,163 to 192,030 11608 mRNA_3241: 11609 - SUPERFAMILY--SSF52047, at 192,497 to 194,768 11609 mRNA_3242: 11610 - K01814 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, at 194,883 to 196,226 11610 mRNA_3243: 11611 - K10752 RBBP4, HAT2, CAF1, MIS16 histone-binding protein RBBP4, at 196,612 to 198,456 11611 mRNA_3244: 11612 - Hypothetical Protein, at 199,306 to 200,606 11612
Group Condition mRNA_3240 mRNA_3241 mRNA_3242 mRNA_3243 mRNA_3244
11608 11609 11610 11611 11612
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 N.D. N.D. -1.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 N.D. N.D. -0.5
auxotrophy Dropout Complete +0.1 -0.2 N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 N.D. N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 N.D. N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.3 N.D. N.D. -0.5
growth on oleic acid YNB Glucose +0.0 +0.2 N.D. N.D. -0.0
growth on ypd YPD +0.2 -0.1 N.D. N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 N.D. N.D. +0.6
auxotrophy YNB Glucose +0.4 -0.2 N.D. N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.1 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.3 +0.2 N.D. N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 N.D. N.D. +0.8
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 N.D. N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.1 -0.1 N.D. N.D. +0.7
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 N.D. N.D. +1.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.1 N.D. N.D. +2.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.2 N.D. N.D. +1.9
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