Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11610 and 11611 are separated by 385 nucleotides11611 and 11612 are separated by 849 nucleotides11612 and 11613 are separated by 459 nucleotides11613 and 11614 are separated by 1391 nucleotides mRNA_3242: 11610 - K01814 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, at 194,883 to 196,226 11610 mRNA_3243: 11611 - K10752 RBBP4, HAT2, CAF1, MIS16 histone-binding protein RBBP4, at 196,612 to 198,456 11611 mRNA_3244: 11612 - Hypothetical Protein, at 199,306 to 200,606 11612 mRNA_3245: 11613 - HMMPfam-Fungal protein of unknown function (DUF1752)-PF08550,HMMPfam-Protein of unknown function (DUF3295)-PF11702, at 201,066 to 204,037 11613 mRNA_3246: 11614 - Hypothetical Protein, at 205,429 to 207,188 11614
Group Condition mRNA_3242 mRNA_3243 mRNA_3244 mRNA_3245 mRNA_3246
11610 11611 11612 11613 11614
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -1.9 -0.6 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.5 -1.7 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.2 -1.6 -0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.0 -0.8 -0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.0 -0.7 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.4 -0.4
auxotrophy Dropout Complete N.D. N.D. -0.3 +0.1 -0.3
auxotrophy YNB Glucose N.D. N.D. +0.2 -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.5 +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +2.0 -1.8 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.3 -0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +1.9 -1.4 -0.6
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.3 +0.5 -0.2
growth on ypd YPD N.D. N.D. +0.1 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.6 -0.0 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.6 +0.9 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.4 +0.3 -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +1.3 -0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.2 +1.4 -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.8 +0.7 -0.0
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.7 +1.1 -0.1
remove
mRNA_3242
plot
remove
mRNA_3243
plot
remove
mRNA_3244
remove
mRNA_3245
plot
remove
mRNA_3246
plot