Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11611 and 11612 are separated by 849 nucleotides
11612 and 11613 are separated by 459 nucleotides
11613 and 11614 are separated by 1391 nucleotides
11614 and 11615 are separated by 397 nucleotides
mRNA_3243: 11611 - K10752 RBBP4, HAT2, CAF1, MIS16 histone-binding protein RBBP4, at 196,612 to 198,456
11611
mRNA_3244: 11612 - Hypothetical Protein, at 199,306 to 200,606
11612
mRNA_3245: 11613 - HMMPfam-Fungal protein of unknown function (DUF1752)-PF08550,HMMPfam-Protein of unknown function (DUF3295)-PF11702, at 201,066 to 204,037
11613
mRNA_3246: 11614 - Hypothetical Protein, at 205,429 to 207,188
11614
mRNA_3247: 11615 - Hypothetical Protein, at 207,586 to 209,247
11615
Group
Condition
mRNA
_3243
mRNA
_3244
mRNA
_3245
mRNA
_3246
mRNA
_3247
11611
11612
11613
11614
11615
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.5
-1.7
-0.3
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-1.9
-0.6
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
-1.6
-0.3
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
-0.8
-0.1
-0.3
growth on oleic acid
YNB Glucose
N.D.
-0.0
-0.7
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.5
+0.0
+0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
-0.4
-0.4
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+2.0
-1.8
-0.4
-0.2
auxotrophy
Dropout Complete
N.D.
-0.3
+0.1
-0.3
+0.1
auxotrophy
YNB Glucose
N.D.
+0.2
-0.4
-0.2
+0.1
growth on ypd
YPD
N.D.
+0.1
+0.2
-0.2
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+1.9
-1.4
-0.6
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
-0.3
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.6
-0.0
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
+0.5
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.6
+0.9
-0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.4
+0.3
-0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+1.3
-0.2
-0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
+1.4
-0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.8
+0.7
-0.0
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
+0.7
+1.1
-0.1
+0.0
remove
mRNA_3243
plot
remove
mRNA_3244
plot
remove
mRNA_3245
remove
mRNA_3246
plot
remove
mRNA_3247
plot