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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11614 and 11615 are separated by 397 nucleotides
11615 and 11616 are separated by 907 nucleotides
11616 and 11617 are separated by 476 nucleotides
11617 and 11618 are separated by 155 nucleotides
mRNA_3246: 11614 - Hypothetical Protein, at 205,429 to 207,188
11614
mRNA_3247: 11615 - Hypothetical Protein, at 207,586 to 209,247
11615
mRNA_3248: 11616 - Hypothetical Protein, at 210,155 to 211,275
11616
mRNA_3249: 11617 - Hypothetical Protein, at 211,752 to 212,300
11617
mRNA_3250: 11618 - K00415 QCR2, UQCRC2 ubiquinol-cytochrome c reductase core subunit 2, at 212,456 to 214,047
11618
Group
Condition
mRNA
_3246
mRNA
_3247
mRNA
_3248
mRNA
_3249
mRNA
_3250
11614
11615
11616
11617
11618
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.3
-2.0
-1.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.2
-0.4
+0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.2
-0.4
+0.0
N.D.
growth on ypd
YPD
-0.2
-0.3
-0.4
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.1
+0.1
-0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.1
-0.1
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
-0.4
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.1
+0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.0
+0.3
-0.5
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.4
+0.1
+0.0
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.1
+0.3
+0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
-0.1
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.1
+0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
+0.3
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.2
+0.3
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.1
+0.2
-0.1
N.D.
auxotrophy
Dropout Complete
-0.3
+0.1
-0.2
+0.5
N.D.
auxotrophy
YNB Glucose
-0.2
+0.1
+0.2
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
+0.0
+0.2
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.2
+0.4
-0.0
N.D.
growth on oleic acid
YNB Glucose
-0.1
-0.1
+0.4
+0.2
N.D.
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