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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11630 and 11631 are separated by 103 nucleotides
11631 and 11632 are separated by 264 nucleotides
11632 and 11633 are separated by 95 nucleotides
11633 and 11634 are separated by 1142 nucleotides
mRNA_3262: 11630 - SUPERFAMILY--SSF47616, at 239,833 to 240,831
11630
mRNA_3263: 11631 - BLAST Receptor-activated Ca2+-permeable cation channel [Rho..., at 240,935 to 243,648
11631
mRNA_3264: 11632 - K08495 GOSR1, GOS1 golgi SNAP receptor complex member 1, at 243,913 to 244,924
11632
mRNA_3265: 11633 - Hypothetical Protein, at 245,020 to 245,530
11633
mRNA_3266: 11634 - K14763 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1, at 246,673 to 247,957
11634
Group
Condition
mRNA
_3262
mRNA
_3263
mRNA
_3264
mRNA
_3265
mRNA
_3266
11630
11631
11632
11633
11634
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
N.D.
N.D.
N.D.
growth on ypd
YPD
N.D.
-0.2
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
N.D.
N.D.
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.1
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.0
N.D.
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.0
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
N.D.
N.D.
N.D.
auxotrophy
Dropout Complete
N.D.
+0.2
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose
N.D.
+0.3
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.4
N.D.
N.D.
N.D.
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