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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11633 and 11634 are separated by 1142 nucleotides
11634 and 11635 are separated by 624 nucleotides
11635 and 11636 are separated by 205 nucleotides
11636 and 11637 are separated by 428 nucleotides
mRNA_3265: 11633 - Hypothetical Protein, at 245,020 to 245,530
11633
mRNA_3266: 11634 - K14763 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1, at 246,673 to 247,957
11634
mRNA_3267: 11635 - K02357 tsf, TSFM elongation factor Ts, at 248,582 to 249,766
11635
mRNA_3268: 11636 - Hypothetical Protein, at 249,972 to 250,888
11636
mRNA_3269: 11637 - Hypothetical Protein, at 251,317 to 251,625
11637
Group
Condition
mRNA
_3265
mRNA
_3266
mRNA
_3267
mRNA
_3268
mRNA
_3269
11633
11634
11635
11636
11637
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
N.D.
-0.9
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
N.D.
-0.8
growth on ypd
YPD
N.D.
N.D.
N.D.
N.D.
-0.6
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
N.D.
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
N.D.
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
N.D.
-0.4
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
N.D.
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
N.D.
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
N.D.
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
N.D.
+0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
N.D.
+1.1
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