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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11634 and 11635 are separated by 624 nucleotides
11635 and 11636 are separated by 205 nucleotides
11636 and 11637 are separated by 428 nucleotides
11637 and 11638 are separated by 452 nucleotides
mRNA_3266: 11634 - K14763 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1, at 246,673 to 247,957
11634
mRNA_3267: 11635 - K02357 tsf, TSFM elongation factor Ts, at 248,582 to 249,766
11635
mRNA_3268: 11636 - Hypothetical Protein, at 249,972 to 250,888
11636
mRNA_3269: 11637 - Hypothetical Protein, at 251,317 to 251,625
11637
mRNA_3270: 11638 - Hypothetical Protein, at 252,078 to 253,678
11638
Group
Condition
mRNA
_3266
mRNA
_3267
mRNA
_3268
mRNA
_3269
mRNA
_3270
11634
11635
11636
11637
11638
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
-0.9
-1.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.3
-1.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
-0.4
-1.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
+0.5
-1.9
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
-0.5
-0.8
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
-0.8
-0.5
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
-0.1
-1.2
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
-0.4
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.5
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
+0.0
-1.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
-0.5
-0.4
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
-0.4
-0.5
growth on ypd
YPD
N.D.
N.D.
N.D.
-0.6
+0.0
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
+0.1
-0.6
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.1
-0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.0
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.8
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.7
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
+1.1
-0.1
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