Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11641 and 11642 are separated by 350 nucleotides11642 and 11643 are separated by 57 nucleotides11643 and 11644 are separated by 188 nucleotides11644 and 11645 are separated by 724 nucleotides mRNA_3273: 11641 - K13754 SLC24A6, NCKX6 solute carrier family 24 (sodium/potassium/calcium exchanger), member 6, at 259,466 to 262,865 11641 mRNA_3274: 11642 - K00108 betA, CHDH choline dehydrogenase, at 263,216 to 265,708 11642 mRNA_3275: 11643 - BLAST methyltransferase [Obba rivulosa], at 265,766 to 267,917 11643 mRNA_3276: 11644 - BLAST Nuclease PA3 [Grifola frondosa], at 268,106 to 268,881 11644 mRNA_3277: 11645 - K14835 NOP2 ribosomal RNA methyltransferase Nop2, at 269,606 to 272,171 11645
Group Condition mRNA_3273 mRNA_3274 mRNA_3275 mRNA_3276 mRNA_3277
11641 11642 11643 11644 11645
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.6 -0.0 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 -0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 -0.1 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.1 -0.1 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.4 -0.3 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.1 -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.0 -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.1 -0.2 -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.0 -0.1 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.0 -0.2 +0.4 N.D.
auxotrophy Dropout Complete +0.0 +0.1 +0.1 +0.1 N.D.
growth on oleic acid YNB Glucose +0.2 +0.0 -0.0 +0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.4 +0.1 +0.0 -0.2 N.D.
auxotrophy YNB Glucose +0.2 +0.1 +0.2 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 +0.2 +0.1 N.D.
growth on ypd YPD -0.2 +0.5 +0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 +0.2 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.3 +0.1 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.4 +0.2 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.4 +0.1 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 +0.1 +0.1 N.D.
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