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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11651 and 11652 are separated by 128 nucleotides
11652 and 11653 are separated by 620 nucleotides
11653 and 11654 are separated by 639 nucleotides
11654 and 11655 are separated by 269 nucleotides
mRNA_3283: 11651 - K20224 IPO9, RANBP9 importin-9, at 287,035 to 291,052
11651
mRNA_3284: 11652 - BLAST something about silencing, SAS, complex subunit 4 [Rh..., at 291,181 to 293,324
11652
mRNA_3285: 11653 - KOG2069 Golgi transport complex subunit, at 293,945 to 296,560
11653
mRNA_3286: 11654 - Hypothetical Protein, at 297,200 to 297,720
11654
mRNA_3287: 11655 - Hypothetical Protein, at 297,990 to 298,361
11655
Group
Condition
mRNA
_3283
mRNA
_3284
mRNA
_3285
mRNA
_3286
mRNA
_3287
11651
11652
11653
11654
11655
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.6
-0.4
-0.2
-2.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-1.3
-0.4
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.6
+0.2
+0.0
-0.9
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
+0.9
-1.4
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.9
+0.6
-1.5
-1.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
+1.3
-1.0
-1.3
auxotrophy
YNB Glucose
N.D.
-0.2
+0.6
-0.6
-0.4
growth on oleic acid
YNB Glucose
N.D.
+0.1
+1.0
-0.5
-0.9
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.4
+0.6
-0.6
-0.7
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
+0.7
-0.3
-0.7
auxotrophy
Dropout Complete
N.D.
-0.4
+1.1
+0.0
-1.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
+0.2
-0.5
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
+0.4
+0.0
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.4
+1.6
-1.0
-1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
+1.5
-0.3
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.3
+0.3
+1.9
-1.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.3
+0.2
+1.7
-0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.4
+0.1
+1.9
-0.6
growth on ypd
YPD
N.D.
+0.1
+1.0
+0.2
+0.6
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
+0.6
+1.1
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.4
+0.1
+1.9
+0.1
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