Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11653 and 11654 are separated by 639 nucleotides
11654 and 11655 are separated by 269 nucleotides
11655 and 11656 are separated by 189 nucleotides
11656 and 11657 are separated by 296 nucleotides
mRNA_3285: 11653 - KOG2069 Golgi transport complex subunit, at 293,945 to 296,560
11653
mRNA_3286: 11654 - Hypothetical Protein, at 297,200 to 297,720
11654
mRNA_3287: 11655 - Hypothetical Protein, at 297,990 to 298,361
11655
mRNA_3288: 11656 - K03240 EIF2B5 translation initiation factor eIF-2B subunit epsilon, at 298,551 to 301,179
11656
mRNA_3289: 11657 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 301,476 to 302,545
11657
Group
Condition
mRNA
_3285
mRNA
_3286
mRNA
_3287
mRNA
_3288
mRNA
_3289
11653
11654
11655
11656
11657
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.2
-2.2
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-1.5
-1.1
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.9
-1.4
-0.7
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+1.3
-1.0
-1.3
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.3
-0.1
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.0
-0.9
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.6
-0.6
-0.7
N.D.
N.D.
growth on oleic acid
YNB Glucose
+1.0
-0.5
-0.9
N.D.
N.D.
auxotrophy
YNB Glucose
+0.6
-0.6
-0.4
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.5
-0.0
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.6
-1.0
-1.0
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.7
-0.3
-0.7
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.4
+0.0
-0.5
N.D.
N.D.
auxotrophy
Dropout Complete
+1.1
+0.0
-1.0
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.5
-0.3
-0.6
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+1.9
-1.4
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+1.7
-0.7
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+1.9
-0.6
N.D.
N.D.
growth on ypd
YPD
+1.0
+0.2
+0.6
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+1.9
+0.1
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.6
+1.1
+0.5
N.D.
N.D.
remove
mRNA_3285
plot
remove
mRNA_3286
plot
remove
mRNA_3287
remove
mRNA_3288
plot
remove
mRNA_3289
plot