Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11662 and 11663 are separated by 107 nucleotides11663 and 11664 are separated by 329 nucleotides11664 and 11665 are separated by 406 nucleotides11665 and 11666 are separated by 394 nucleotides mRNA_3294: 11662 - K20368 CNIH, ERV14 protein cornichon, at 319,706 to 321,575 11662 mRNA_3295: 11663 - K14324 SAP18 histone deacetylase complex subunit SAP18, at 321,683 to 322,724 11663 mRNA_3296: 11664 - Interpro PPR repeat family, at 323,054 to 326,094 11664 mRNA_3297: 11665 - K11173 ADHFE1 hydroxyacid-oxoacid transhydrogenase, at 326,501 to 328,972 11665 mRNA_3298: 11666 - Hypothetical Protein, at 329,367 to 333,104 11666
Group Condition mRNA_3294 mRNA_3295 mRNA_3296 mRNA_3297 mRNA_3298
11662 11663 11664 11665 11666
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.9 N.D. +0.1 -0.5
growth on oleic acid YNB Glucose N.D. -1.1 N.D. -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.6 N.D. -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.8 N.D. -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -1.1 N.D. +0.1 -0.1
auxotrophy Dropout Complete N.D. -0.7 N.D. -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.7 N.D. +0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 N.D. +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 N.D. -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.4 N.D. +0.1 +0.0
growth on oleic acid YNB Oleic Acid N.D. -0.3 N.D. -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 N.D. +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 N.D. -0.0 +0.0
auxotrophy YNB Glucose N.D. -0.3 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.4 N.D. -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 N.D. +0.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 N.D. +0.1 +0.3
growth on ypd YPD N.D. +0.2 N.D. +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 N.D. +0.1 -0.0
remove
mRNA_3294
plot
remove
mRNA_3295
plot
remove
mRNA_3296
remove
mRNA_3297
plot
remove
mRNA_3298
plot