Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11662 and 11663 are separated by 107 nucleotides
11663 and 11664 are separated by 329 nucleotides
11664 and 11665 are separated by 406 nucleotides
11665 and 11666 are separated by 394 nucleotides
mRNA_3294: 11662 - K20368 CNIH, ERV14 protein cornichon, at 319,706 to 321,575
11662
mRNA_3295: 11663 - K14324 SAP18 histone deacetylase complex subunit SAP18, at 321,683 to 322,724
11663
mRNA_3296: 11664 - Interpro PPR repeat family, at 323,054 to 326,094
11664
mRNA_3297: 11665 - K11173 ADHFE1 hydroxyacid-oxoacid transhydrogenase, at 326,501 to 328,972
11665
mRNA_3298: 11666 - Hypothetical Protein, at 329,367 to 333,104
11666
Group
Condition
mRNA
_3294
mRNA
_3295
mRNA
_3296
mRNA
_3297
mRNA
_3298
11662
11663
11664
11665
11666
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.9
N.D.
+0.1
-0.5
growth on oleic acid
YNB Glucose
N.D.
-1.1
N.D.
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.6
N.D.
-0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.8
N.D.
-0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-1.1
N.D.
+0.1
-0.1
auxotrophy
Dropout Complete
N.D.
-0.7
N.D.
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.7
N.D.
+0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.5
N.D.
+0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.4
N.D.
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
N.D.
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.4
N.D.
+0.1
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
-0.3
N.D.
-0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
N.D.
+0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
N.D.
-0.0
+0.0
auxotrophy
YNB Glucose
N.D.
-0.3
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.4
N.D.
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
N.D.
+0.0
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
N.D.
+0.1
+0.3
growth on ypd
YPD
N.D.
+0.2
N.D.
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.4
N.D.
+0.1
-0.0
remove
mRNA_3294
plot
remove
mRNA_3295
plot
remove
mRNA_3296
remove
mRNA_3297
plot
remove
mRNA_3298
plot