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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11663 and 11664 are separated by 329 nucleotides
11664 and 11665 are separated by 406 nucleotides
11665 and 11666 are separated by 394 nucleotides
11666 and 11667 are separated by 653 nucleotides
mRNA_3295: 11663 - K14324 SAP18 histone deacetylase complex subunit SAP18, at 321,683 to 322,724
11663
mRNA_3296: 11664 - Interpro PPR repeat family, at 323,054 to 326,094
11664
mRNA_3297: 11665 - K11173 ADHFE1 hydroxyacid-oxoacid transhydrogenase, at 326,501 to 328,972
11665
mRNA_3298: 11666 - Hypothetical Protein, at 329,367 to 333,104
11666
mRNA_3299: 11667 - K19704 PTC1 protein phosphatase PTC1, at 333,758 to 335,633
11667
Group
Condition
mRNA
_3295
mRNA
_3296
mRNA
_3297
mRNA
_3298
mRNA
_3299
11663
11664
11665
11666
11667
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
N.D.
+0.1
-0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
+0.1
+0.3
-1.2
auxotrophy
YNB Glucose 75mM Methionine
-0.6
N.D.
-0.2
-0.3
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
N.D.
+0.1
-0.5
+0.6
growth on oleic acid
YNB Glucose
-1.1
N.D.
-0.0
-0.1
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
N.D.
-0.2
-0.1
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
N.D.
-0.1
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
-0.2
-0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
N.D.
+0.1
-0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
-0.0
+0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
N.D.
-0.2
-0.2
+0.9
auxotrophy
YNB Glucose 75mM Arginine
-0.7
N.D.
+0.1
-0.0
+0.4
auxotrophy
Dropout Complete
-0.7
N.D.
-0.0
+0.1
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.0
N.D.
+0.1
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
-0.0
+0.1
-0.0
growth on ricinoleic acid
YNB Glucose
-0.4
N.D.
+0.1
+0.0
+0.4
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
-0.0
+0.1
+0.5
auxotrophy
YNB Glucose
-0.3
N.D.
+0.1
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
N.D.
+0.0
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
N.D.
+0.1
-0.0
+0.3
growth on ypd
YPD
+0.2
N.D.
+0.2
-0.1
+0.5
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