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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11664 and 11665 are separated by 406 nucleotides
11665 and 11666 are separated by 394 nucleotides
11666 and 11667 are separated by 653 nucleotides
11667 and 11668 are separated by 160 nucleotides
mRNA_3296: 11664 - Interpro PPR repeat family, at 323,054 to 326,094
11664
mRNA_3297: 11665 - K11173 ADHFE1 hydroxyacid-oxoacid transhydrogenase, at 326,501 to 328,972
11665
mRNA_3298: 11666 - Hypothetical Protein, at 329,367 to 333,104
11666
mRNA_3299: 11667 - K19704 PTC1 protein phosphatase PTC1, at 333,758 to 335,633
11667
mRNA_3300: 11668 - HMMPfam-Amidohydrolase-PF13147,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 335,794 to 339,454
11668
Group
Condition
mRNA
_3296
mRNA
_3297
mRNA
_3298
mRNA
_3299
mRNA
_3300
11664
11665
11666
11667
11668
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
-0.1
-0.6
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.3
-1.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.0
+0.0
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
-0.1
-0.0
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
-0.1
-0.3
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
-0.0
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.5
+0.6
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
-0.3
+0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
-0.3
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.0
+0.1
-0.0
+0.1
growth on oleic acid
YNB Glucose
N.D.
-0.0
-0.1
+0.5
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
-0.3
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
-0.0
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.0
-0.0
+0.4
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
+0.1
+0.5
-0.0
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.0
+0.4
+0.0
growth on ypd
YPD
N.D.
+0.2
-0.1
+0.5
-0.1
auxotrophy
Dropout Complete
N.D.
-0.0
+0.1
+0.5
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
-0.2
+0.9
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
-0.0
+0.4
+0.2
auxotrophy
YNB Glucose
N.D.
+0.1
+0.1
+0.4
+0.2
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