Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11667 and 11668 are separated by 160 nucleotides11668 and 11669 are separated by 253 nucleotides11669 and 11670 are separated by 1362 nucleotides11670 and 11671 are separated by 4994 nucleotides mRNA_3299: 11667 - K19704 PTC1 protein phosphatase PTC1, at 333,758 to 335,633 11667 mRNA_3300: 11668 - HMMPfam-Amidohydrolase-PF13147,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 335,794 to 339,454 11668 mRNA_3301: 11669 - K08197 ARN MFS transporter, SIT family, siderophore-iron-H+ symporter, at 339,708 to 341,858 11669 mRNA_3302: 11670 - K07232 chaC cation transport protein ChaC, at 343,221 to 344,290 11670 mRNA_3303: 11671 - K03249 EIF3F translation initiation factor 3 subunit F, at 349,285 to 350,385 11671
Group Condition mRNA_3299 mRNA_3300 mRNA_3301 mRNA_3302 mRNA_3303
11667 11668 11669 11670 11671
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 +0.2 +0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.0 +0.4 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.2 -0.5 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 -0.1 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 +0.0 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 -0.0 +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 +0.0 +0.4 N.D.
growth on ypd YPD +0.5 -0.1 -0.4 +0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.3 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.0 -0.1 +0.4 N.D.
growth on oleic acid YNB Glucose +0.5 -0.3 -0.0 +0.8 N.D.
auxotrophy YNB Glucose +0.4 +0.2 -0.0 +0.9 N.D.
growth on ricinoleic acid YNB Glucose +0.4 +0.0 -0.1 +1.1 N.D.
auxotrophy Dropout Complete +0.5 +0.1 -0.1 +1.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.2 +0.0 +1.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.2 +0.1 +1.1 N.D.
growth on oleic acid YNB Oleic Acid +0.5 -0.0 -0.1 +1.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.0 +0.1 +2.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.9 +0.1 +0.3 +1.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.1 +0.1 +2.5 N.D.
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