Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11673 and 11674 are separated by 13 nucleotides
11674 and 11675 are separated by 249 nucleotides
11675 and 11676 are separated by 786 nucleotides
11676 and 11677 are separated by 603 nucleotides
mRNA_3305: 11673 - KOG3299 Uncharacterized conserved protein, at 352,927 to 353,808
11673
mRNA_3306: 11674 - KOG0845 Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116), at 353,822 to 355,437
11674
mRNA_3307: 11675 - K06268 PPP3R, CNB serine/threonine-protein phosphatase 2B regulatory subunit, at 355,687 to 356,880
11675
mRNA_3308: 11676 - KOG2533 Permease of the major facilitator superfamily, at 357,667 to 359,935
11676
mRNA_3309: 11677 - HMMPfam-Amidohydrolase family-PF01979,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 360,539 to 362,421
11677
Group
Condition
mRNA
_3305
mRNA
_3306
mRNA
_3307
mRNA
_3308
mRNA
_3309
11673
11674
11675
11676
11677
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.5
N.D.
-1.0
-0.7
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
N.D.
-1.4
-0.3
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
-1.6
N.D.
+0.2
-0.5
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
N.D.
-0.5
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
N.D.
-0.6
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
N.D.
+0.8
-0.3
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
-0.5
+0.0
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.5
N.D.
-0.5
+0.2
+0.0
growth on ypd
YPD
+0.1
N.D.
+0.2
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
N.D.
+0.5
-0.2
+0.2
growth on oleic acid
YNB Glucose
-0.8
N.D.
+1.6
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
+0.6
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
N.D.
+0.9
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.8
N.D.
+2.4
+0.0
-0.2
growth on ricinoleic acid
YNB Glucose
+0.6
N.D.
+2.3
-0.4
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
N.D.
+3.4
-0.3
-0.4
auxotrophy
YNB Glucose
+0.7
N.D.
+1.9
+0.2
+0.1
auxotrophy
Dropout Complete
+1.2
N.D.
+1.9
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+1.7
N.D.
+1.6
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+2.2
N.D.
+1.8
+0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.2
N.D.
+3.6
-0.7
+0.0
remove
mRNA_3305
plot
remove
mRNA_3306
plot
remove
mRNA_3307
remove
mRNA_3308
plot
remove
mRNA_3309
plot