Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11676 and 11677 are separated by 603 nucleotides11677 and 11678 are separated by 1337 nucleotides11678 and 11679 are separated by 139 nucleotides11679 and 11680 are separated by 375 nucleotides mRNA_3308: 11676 - KOG2533 Permease of the major facilitator superfamily, at 357,667 to 359,935 11676 mRNA_3309: 11677 - HMMPfam-Amidohydrolase family-PF01979,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 360,539 to 362,421 11677 mRNA_3310: 11678 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 363,759 to 365,853 11678 mRNA_3311: 11679 - K00134 GAPDH, gapA glyceraldehyde 3-phosphate dehydrogenase, at 365,993 to 367,448 11679 mRNA_3312: 11680 - Hypothetical Protein, at 367,824 to 368,675 11680
Group Condition mRNA_3308 mRNA_3309 mRNA_3310 mRNA_3311 mRNA_3312
11676 11677 11678 11679 11680
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.9 -0.2 -0.8 -3.3
growth on ypd YPD +0.0 -0.1 -0.1 -0.4 -0.6
growth on oleic acid YNB Oleic Acid +0.0 -0.2 -0.0 -0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 -0.7 +0.1 -0.3
auxotrophy Dropout Complete -0.1 -0.0 +0.0 -0.1 -0.5
auxotrophy YNB Glucose +0.2 +0.1 -0.1 +0.2 -0.8
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.2 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 +0.0 +0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.0 +0.2 -0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 +0.0 +0.4 -0.2 +0.3
growth on oleic acid YNB Glucose -0.2 +0.1 -0.3 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 -0.2 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 -0.0 -0.4 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.4 +0.6 -0.5 +0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.3 +0.1 +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.4 +0.1 +0.2 +0.1 +0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 +0.3 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.2 -0.5 +0.1 +1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 +0.0 +0.2 +0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.0 -0.2 +0.3 +1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 -0.0 +0.2 +0.7
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