Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11680 and 11681 are separated by 1216 nucleotides11681 and 11682 are separated by 179 nucleotides11682 and 11683 are separated by 920 nucleotides11683 and 11684 are separated by 366 nucleotides mRNA_3312: 11680 - Hypothetical Protein, at 367,824 to 368,675 11680 mRNA_3313: 11681 - K00030 IDH3 isocitrate dehydrogenase (NAD+), at 369,892 to 372,180 11681 mRNA_3314: 11682 - K00030 IDH3 isocitrate dehydrogenase (NAD+), at 372,360 to 374,414 11682 mRNA_3315: 11683 - K18637 AXL2 axial budding pattern protein 2, at 375,335 to 379,207 11683 mRNA_3316: 11684 - K15223 UAF30, SPP27 upstream activation factor subunit UAF30, at 379,574 to 381,154 11684
Group Condition mRNA_3312 mRNA_3313 mRNA_3314 mRNA_3315 mRNA_3316
11680 11681 11682 11683 11684
ypd buoyancy 40 hrs No Buoyancy Separation -3.3 -2.2 N.D. +0.1 -0.6
growth on ypd YPD -0.6 -1.7 N.D. -0.2 -0.2
auxotrophy Dropout Complete -0.5 -1.6 N.D. -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -1.1 N.D. -0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -1.1 N.D. -0.6 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -1.2 N.D. -0.4 +0.1
growth on ricinoleic acid YNB Glucose +0.5 -2.8 N.D. +0.4 +0.3
auxotrophy YNB Glucose -0.8 -0.7 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.9 -2.7 N.D. +0.8 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.8 N.D. +0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.0 N.D. -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 -1.5 N.D. +0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -1.0 N.D. -0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.2 -1.5 N.D. -0.4 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 -0.6 N.D. -0.4 -0.1
growth on oleic acid YNB Glucose +0.2 -0.5 N.D. +0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -1.0 N.D. +0.4 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 N.D. +0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.3 N.D. +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.0 -0.0 N.D. +0.0 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.5 N.D. +0.5 -0.0
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