Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11683 and 11684 are separated by 366 nucleotides11684 and 11685 are separated by 257 nucleotides11685 and 11686 are separated by 919 nucleotides11686 and 11687 are separated by 214 nucleotides mRNA_3315: 11683 - K18637 AXL2 axial budding pattern protein 2, at 375,335 to 379,207 11683 mRNA_3316: 11684 - K15223 UAF30, SPP27 upstream activation factor subunit UAF30, at 379,574 to 381,154 11684 mRNA_3317: 11685 - SUPERFAMILY--SSF52540, at 381,412 to 382,785 11685 mRNA_3318: 11686 - K14640 SLC20A, PIT solute carrier family 20 (sodium-dependent phosphate transporter), at 383,705 to 386,213 11686 mRNA_3319: 11687 - KOG3854 SPRT-like metalloprotease, at 386,428 to 389,154 11687
Group Condition mRNA_3315 mRNA_3316 mRNA_3317 mRNA_3318 mRNA_3319
11683 11684 11685 11686 11687
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.2 -0.6 -0.7 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 -0.2 -0.5 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.1 +0.1 -0.2 -0.3
growth on oleic acid YNB Oleic Acid -0.1 -0.4 -0.1 -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.6 +0.0 -0.2 -0.1
auxotrophy Dropout Complete -0.1 -0.1 -0.4 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.1 -0.3 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.1 -0.1 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.4 -0.2 -0.3 +0.3
growth on ypd YPD -0.2 -0.2 -0.0 +0.1 +0.1
auxotrophy YNB Glucose +0.1 -0.1 -0.3 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 -0.2 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 -0.2 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.0 +0.2 -0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.0 -0.1 +0.2 +0.1
growth on ricinoleic acid YNB Glucose +0.4 +0.3 -0.3 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.4 -0.2 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.0 +0.2 +0.0 -0.2
growth on oleic acid YNB Glucose +0.3 -0.1 +0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.3 +0.1 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 +0.1 -0.2 +0.2 +0.2
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