Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11687 and 11688 are separated by 155 nucleotides11688 and 11689 are separated by 507 nucleotides11689 and 11690 are separated by 1283 nucleotides11690 and 11691 are separated by 295 nucleotides mRNA_3319: 11687 - KOG3854 SPRT-like metalloprotease, at 386,428 to 389,154 11687 mRNA_3320: 11688 - KOG2493 Na+/Pi symporter, at 389,310 to 390,792 11688 mRNA_3321: 11689 - Hypothetical Protein, at 391,300 to 392,689 11689 mRNA_3322: 11690 - HMMPfam-Ribosomal RNA-processing protein 7 (RRP7)-PF12923, at 393,973 to 395,198 11690 mRNA_3323: 11691 - HMMPfam-RTA1 like protein-PF04479, at 395,494 to 396,830 11691
Group Condition mRNA_3319 mRNA_3320 mRNA_3321 mRNA_3322 mRNA_3323
11687 11688 11689 11690 11691
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 +0.0 -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.5 -0.2 +0.0 -0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.4 +0.2 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.0 -0.1 -0.3
auxotrophy YNB Glucose -0.1 -0.4 +0.0 -0.3 +0.3
growth on oleic acid YNB Glucose -0.0 -0.4 +0.2 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 +0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.4 +0.1 -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.2 +0.1 +0.1 -0.1
auxotrophy Dropout Complete -0.1 -0.4 +0.3 -0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.4 +0.5 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 -0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.0 -0.1 +0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5 +0.1 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 +0.4 +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.2 +0.1 -0.3 +0.4
growth on ricinoleic acid YNB Glucose -0.2 -0.6 +0.2 +0.8 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.3 +0.5 +0.4 +0.3
growth on ypd YPD +0.1 -0.3 +0.0 +0.8 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 +0.2 +0.4 +0.0
remove
mRNA_3319
plot
remove
mRNA_3320
plot
remove
mRNA_3321
remove
mRNA_3322
plot
remove
mRNA_3323
plot