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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11688 and 11689 are separated by 507 nucleotides
11689 and 11690 are separated by 1283 nucleotides
11690 and 11691 are separated by 295 nucleotides
11691 and 11692 are separated by 407 nucleotides
mRNA_3320: 11688 - KOG2493 Na+/Pi symporter, at 389,310 to 390,792
11688
mRNA_3321: 11689 - Hypothetical Protein, at 391,300 to 392,689
11689
mRNA_3322: 11690 - HMMPfam-Ribosomal RNA-processing protein 7 (RRP7)-PF12923, at 393,973 to 395,198
11690
mRNA_3323: 11691 - HMMPfam-RTA1 like protein-PF04479, at 395,494 to 396,830
11691
mRNA_3324: 11692 - HMMPfam-RTA1 like protein-PF04479, at 397,238 to 398,541
11692
Group
Condition
mRNA
_3320
mRNA
_3321
mRNA
_3322
mRNA
_3323
mRNA
_3324
11688
11689
11690
11691
11692
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.1
-0.2
-0.1
-0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
+0.2
-0.4
-1.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
-0.1
-0.4
-0.6
auxotrophy
YNB Glucose
-0.4
+0.0
-0.3
+0.3
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.2
+0.0
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.0
-0.4
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.4
+0.2
-0.2
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.1
+0.1
-0.1
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
-0.1
-0.3
-0.2
auxotrophy
Dropout Complete
-0.4
+0.3
-0.2
+0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.1
-0.1
-0.3
+0.0
growth on oleic acid
YNB Glucose
-0.4
+0.2
-0.1
-0.2
+0.4
growth on oleic acid
YNB Oleic Acid
-0.4
+0.2
-0.2
+0.0
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.1
-0.3
+0.4
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.4
+0.5
+0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.1
+0.3
+0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.2
+0.4
+0.0
-0.0
growth on ricinoleic acid
YNB Glucose
-0.6
+0.2
+0.8
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.5
+0.4
+0.3
-0.2
growth on ypd
YPD
-0.3
+0.0
+0.8
-0.0
+0.4
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