Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11692 and 11693 are separated by 176 nucleotides
11693 and 11694 are separated by 825 nucleotides
11694 and 11695 are separated by 323 nucleotides
11695 and 11696 are separated by 133 nucleotides
mRNA_3324: 11692 - HMMPfam-RTA1 like protein-PF04479, at 397,238 to 398,541
11692
mRNA_3325: 11693 - Hypothetical Protein, at 398,718 to 399,832
11693
mRNA_3326: 11694 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 400,658 to 402,328
11694
mRNA_3327: 11695 - HMMPfam-BAG domain-PF02179,SUPERFAMILY--SSF63491, at 402,652 to 404,277
11695
mRNA_3328: 11696 - BLAST YALIA101S10e03422g1_1 [Yarrowia lipolytica], at 404,411 to 405,058
11696
Group
Condition
mRNA
_3324
mRNA
_3325
mRNA
_3326
mRNA
_3327
mRNA
_3328
11692
11693
11694
11695
11696
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.9
-1.3
-0.2
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-1.2
-0.1
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
-1.1
+0.0
+0.2
-0.5
auxotrophy
YNB Glucose
-0.5
-0.3
-0.1
-0.3
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.1
-0.9
+0.0
+0.4
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.6
+0.2
+0.2
-1.1
growth on ypd
YPD
+0.4
+0.1
-0.3
-0.4
-1.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.1
+0.0
-0.1
-1.0
auxotrophy
Dropout Complete
-0.2
+0.2
-0.0
+0.1
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.2
-0.3
-0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.3
+0.3
+0.4
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
+0.0
+0.2
-0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.2
+0.0
+0.3
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
+0.2
+0.0
-0.2
+0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.4
+0.2
-0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.0
+0.2
-0.5
+0.3
growth on ricinoleic acid
YNB Glucose
+0.1
-0.3
-0.0
-0.1
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.1
-0.1
-0.0
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+1.1
+0.2
-0.3
+0.5
growth on oleic acid
YNB Glucose
+0.4
+0.9
-0.4
-0.2
+0.9
growth on oleic acid
YNB Oleic Acid
+0.5
+0.8
+0.1
-0.1
+0.8
remove
mRNA_3324
plot
remove
mRNA_3325
plot
remove
mRNA_3326
remove
mRNA_3327
plot
remove
mRNA_3328
plot