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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11694 and 11695 are separated by 323 nucleotides
11695 and 11696 are separated by 133 nucleotides
11696 and 11697 are separated by 350 nucleotides
11697 and 11698 are separated by 556 nucleotides
mRNA_3326: 11694 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 400,658 to 402,328
11694
mRNA_3327: 11695 - HMMPfam-BAG domain-PF02179,SUPERFAMILY--SSF63491, at 402,652 to 404,277
11695
mRNA_3328: 11696 - BLAST YALIA101S10e03422g1_1 [Yarrowia lipolytica], at 404,411 to 405,058
11696
mRNA_3329: 11697 - Hypothetical Protein, at 405,409 to 406,722
11697
mRNA_3330: 11698 - Hypothetical Protein, at 407,279 to 408,287
11698
Group
Condition
mRNA
_3326
mRNA
_3327
mRNA
_3328
mRNA
_3329
mRNA
_3330
11694
11695
11696
11697
11698
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.2
-1.1
-1.2
-0.6
growth on ypd
YPD
-0.3
-0.4
-1.0
+0.2
-0.6
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.1
-1.0
+0.2
-0.7
auxotrophy
YNB Glucose
-0.1
-0.3
-0.7
+0.4
-0.6
auxotrophy
Dropout Complete
-0.0
+0.1
-0.8
+0.5
-0.8
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.3
-0.6
-0.2
-0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.2
-0.3
+0.3
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.2
-0.4
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.4
-0.4
-0.6
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.2
-0.5
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.2
-0.5
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
-0.0
+0.3
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.1
+0.2
+0.6
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.5
+0.3
+0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.2
+0.5
-0.1
-0.0
growth on oleic acid
YNB Glucose
-0.4
-0.2
+0.9
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.4
-0.3
+0.4
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
-0.1
+0.5
+0.4
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.0
+0.5
+0.8
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
+0.8
-0.0
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.3
+0.5
+0.3
+0.6
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