Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11701 and 11702 are separated by 101 nucleotides11702 and 11703 are separated by 114 nucleotides11703 and 11704 are separated by 139 nucleotides11704 and 11705 are separated by 307 nucleotides mRNA_3333: 11701 - K05283 PIGW phosphatidylinositol glycan, class W, at 411,670 to 413,695 11701 mRNA_3334: 11702 - K03936 NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, at 413,797 to 414,963 11702 mRNA_3335: 11703 - Hypothetical Protein, at 415,078 to 415,551 11703 mRNA_3336: 11704 - K07827 KRAS, KRAS2 GTPase KRas, at 415,691 to 416,703 11704 mRNA_3337: 11705 - KOG3336 Predicted member of the intramitochondrial sorting protein family, at 417,011 to 417,925 11705
Group Condition mRNA_3333 mRNA_3334 mRNA_3335 mRNA_3336 mRNA_3337
11701 11702 11703 11704 11705
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.3 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.6 +0.0 N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.1 -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.3 +0.1 N.D.
growth on oleic acid YNB Glucose N.D. N.D. +0.0 -0.2 N.D.
growth on ypd YPD N.D. N.D. +0.1 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.1 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.1 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.4 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.1 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.5 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.3 -0.1 N.D.
auxotrophy YNB Glucose N.D. N.D. +0.6 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.4 -0.0 N.D.
auxotrophy Dropout Complete N.D. N.D. +0.6 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.3 +0.0 N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.3 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.4 +0.1 N.D.
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