Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11704 and 11705 are separated by 307 nucleotides11705 and 11706 are separated by 1264 nucleotides11706 and 11707 are separated by 333 nucleotides11707 and 11708 are separated by 243 nucleotides mRNA_3336: 11704 - K07827 KRAS, KRAS2 GTPase KRas, at 415,691 to 416,703 11704 mRNA_3337: 11705 - KOG3336 Predicted member of the intramitochondrial sorting protein family, at 417,011 to 417,925 11705 mRNA_3338: 11706 - KOG3525 Subtilisin-like proprotein convertase, at 419,190 to 423,102 11706 mRNA_3339: 11707 - KOG2445 Nuclear pore complex component (sc Seh1), at 423,436 to 425,345 11707 mRNA_3340: 11708 - K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1, at 425,589 to 428,080 11708
Group Condition mRNA_3336 mRNA_3337 mRNA_3338 mRNA_3339 mRNA_3340
11704 11705 11706 11707 11708
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.1 -0.1 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. -0.3 +0.1 -0.4
auxotrophy Dropout Complete -0.2 N.D. -0.5 +0.2 -0.4
auxotrophy YNB Glucose -0.2 N.D. -0.5 +0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. +0.2 -0.4 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. -0.1 -0.2 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. -0.5 +0.1 -0.4
growth on oleic acid YNB Glucose -0.2 N.D. -0.2 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.4 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.2 +0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.3 N.D. -0.1 +0.3 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.0 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. -0.3 +0.7 -0.8
growth on ypd YPD -0.3 N.D. -0.1 +0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.2 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.1 +0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. +0.0 -0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.2 +0.2 -0.1
growth on ricinoleic acid YNB Glucose +0.1 N.D. -0.4 +0.6 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. -0.3 +0.7 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.0 +0.3 +0.0
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