Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11705 and 11706 are separated by 1264 nucleotides11706 and 11707 are separated by 333 nucleotides11707 and 11708 are separated by 243 nucleotides11708 and 11709 are separated by 246 nucleotides mRNA_3337: 11705 - KOG3336 Predicted member of the intramitochondrial sorting protein family, at 417,011 to 417,925 11705 mRNA_3338: 11706 - KOG3525 Subtilisin-like proprotein convertase, at 419,190 to 423,102 11706 mRNA_3339: 11707 - KOG2445 Nuclear pore complex component (sc Seh1), at 423,436 to 425,345 11707 mRNA_3340: 11708 - K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1, at 425,589 to 428,080 11708 mRNA_3341: 11709 - K20724 TMEM33 transmembrane protein 33, at 428,327 to 429,727 11709
Group Condition mRNA_3337 mRNA_3338 mRNA_3339 mRNA_3340 mRNA_3341
11705 11706 11707 11708 11709
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 -0.1 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.2 -0.6 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.4 -0.7 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.1 -0.7 +0.2
auxotrophy YNB Glucose N.D. -0.5 +0.2 -0.4 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 +0.1 -0.4 +0.2
auxotrophy Dropout Complete N.D. -0.5 +0.2 -0.4 +0.2
growth on oleic acid YNB Glucose N.D. -0.2 -0.0 -0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.5 +0.1 -0.4 +0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.0 -0.0 -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.1 +0.3 -0.4 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 +0.1 -0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 +0.1 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.2 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -0.2 -0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.7 -0.8 +0.3
growth on ricinoleic acid YNB Glucose N.D. -0.4 +0.6 +0.0 +0.3
growth on ypd YPD N.D. -0.1 +0.0 +0.0 +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 +0.3 +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +0.7 -0.3 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 -0.2 +0.2 +0.8
remove
mRNA_3337
plot
remove
mRNA_3338
plot
remove
mRNA_3339
remove
mRNA_3340
plot
remove
mRNA_3341
plot