Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11715 and 11716 are separated by 624 nucleotides11716 and 11717 are separated by 645 nucleotides11717 and 11718 are separated by 520 nucleotides11718 and 11719 are separated by 674 nucleotides mRNA_3347: 11715 - PRINTS-Proline rich extensin signature-PR01217, at 444,755 to 446,622 11715 mRNA_3348: 11716 - K09831 ERG5, CYP61A sterol 22-desaturase, at 447,247 to 449,563 11716 mRNA_3349: 11717 - K13179 DDX18, HAS1 ATP-dependent RNA helicase DDX18/HAS1, at 450,209 to 452,145 11717 mRNA_3350: 11718 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 452,666 to 460,645 11718 mRNA_3351: 11719 - K12196 VPS4 vacuolar protein-sorting-associated protein 4, at 461,320 to 463,748 11719
Group Condition mRNA_3347 mRNA_3348 mRNA_3349 mRNA_3350 mRNA_3351
11715 11716 11717 11718 11719
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. N.D. -0.2 N.D.
auxotrophy Dropout Complete -0.3 N.D. N.D. -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. N.D. -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. N.D. -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. N.D. -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. N.D. -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. N.D. -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. N.D. +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. +0.0 N.D.
auxotrophy YNB Glucose -0.1 N.D. N.D. -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. N.D. +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. N.D. -0.0 N.D.
growth on oleic acid YNB Glucose +0.2 N.D. N.D. -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.4 N.D. N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. N.D. +0.0 N.D.
growth on ypd YPD +0.7 N.D. N.D. -0.1 N.D.
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