Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11723 and 11724 are separated by 448 nucleotides11724 and 11725 are separated by 182 nucleotides11725 and 11726 are separated by 792 nucleotides11726 and 11727 are separated by 1399 nucleotides mRNA_3355: 11723 - K01126 E3.1.4.46, glpQ, ugpQ glycerophosphoryl diester phosphodiesterase, at 482,754 to 484,525 11723 mRNA_3356: 11724 - K19306 BUD23 18S rRNA (guanine1575-N7)-methyltransferase, at 484,974 to 486,354 11724 mRNA_3357: 11725 - BLAST dna-directed rna polymerase i subunit rpa43 [Rhod..., at 486,537 to 488,799 11725 mRNA_3358: 11726 - Hypothetical Protein, at 489,592 to 490,817 11726 mRNA_3359: 11727 - Hypothetical Protein, at 492,217 to 492,797 11727
Group Condition mRNA_3355 mRNA_3356 mRNA_3357 mRNA_3358 mRNA_3359
11723 11724 11725 11726 11727
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. -1.0 -1.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.2 -0.9 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. +0.5 -0.8 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.1 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.3 -0.5 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.1 +0.0 -0.1
growth on ypd YPD -0.2 N.D. +0.5 -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. -0.2 +0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -0.0 +0.1 -0.2
auxotrophy Dropout Complete +0.2 N.D. -0.1 +0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. +0.1 -0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 N.D. -0.2 -0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.4 +0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.0 +0.2 +0.3
auxotrophy YNB Glucose +0.3 N.D. +0.1 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +0.1 -0.2 +0.4
growth on ricinoleic acid YNB Glucose +0.5 N.D. -0.1 +0.2 +0.2
growth on oleic acid YNB Glucose +0.1 N.D. +0.4 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. +0.6 -0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. +0.4 +0.2 -0.1
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