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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11726 and 11727 are separated by 1399 nucleotides
11727 and 11728 are separated by 398 nucleotides
11728 and 11729 are separated by 420 nucleotides
11729 and 11730 are separated by 389 nucleotides
mRNA_3358: 11726 - Hypothetical Protein, at 489,592 to 490,817
11726
mRNA_3359: 11727 - Hypothetical Protein, at 492,217 to 492,797
11727
mRNA_3360: 11728 - KOG4836 Uncharacterized conserved protein, at 493,196 to 494,520
11728
mRNA_3361: 11729 - K11247 SH3GL endophilin-A, at 494,941 to 495,602
11729
mRNA_3362: 11730 - BLAST vacuolar assembly/sorting protein DID2 [Moesziomyces ..., at 495,992 to 499,759
11730
Group
Condition
mRNA
_3358
mRNA
_3359
mRNA
_3360
mRNA
_3361
mRNA
_3362
11726
11727
11728
11729
11730
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.3
-0.2
-0.9
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.0
-0.4
-0.9
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
-0.1
-0.1
-0.6
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
-0.3
-0.3
+0.7
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.1
-0.6
-0.7
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.5
-0.3
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.2
+0.1
-0.8
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.1
-0.5
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.0
+0.2
-0.4
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.4
-0.3
-0.7
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.1
+0.3
-0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.1
-0.0
-0.0
-0.2
auxotrophy
Dropout Complete
+0.1
+0.0
-0.4
-0.4
+0.4
growth on ypd
YPD
-0.0
-0.0
+0.1
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.0
-0.1
-0.4
+0.3
auxotrophy
YNB Glucose
+0.2
+0.1
-0.3
-0.2
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.0
-0.0
+0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.1
-0.1
-0.1
+0.4
growth on oleic acid
YNB Glucose
+0.2
+0.1
+0.2
-0.1
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
+0.3
-0.1
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
+0.2
+0.2
+0.1
+0.1
+0.2
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