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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11727 and 11728 are separated by 398 nucleotides
11728 and 11729 are separated by 420 nucleotides
11729 and 11730 are separated by 389 nucleotides
11730 and 11731 are separated by 205 nucleotides
mRNA_3359: 11727 - Hypothetical Protein, at 492,217 to 492,797
11727
mRNA_3360: 11728 - KOG4836 Uncharacterized conserved protein, at 493,196 to 494,520
11728
mRNA_3361: 11729 - K11247 SH3GL endophilin-A, at 494,941 to 495,602
11729
mRNA_3362: 11730 - BLAST vacuolar assembly/sorting protein DID2 [Moesziomyces ..., at 495,992 to 499,759
11730
mRNA_3363: 11731 - K02871 RP-L13, MRPL13, rplM large subunit ribosomal protein L13, at 499,965 to 500,841
11731
Group
Condition
mRNA
_3359
mRNA
_3360
mRNA
_3361
mRNA
_3362
mRNA
_3363
11727
11728
11729
11730
11731
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.4
-0.9
-0.7
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.6
-0.7
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.2
-0.9
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
-0.6
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.3
-0.1
-0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.1
-0.8
+0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.5
-0.0
-0.1
N.D.
auxotrophy
Dropout Complete
+0.0
-0.4
-0.4
+0.4
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
-0.0
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-0.3
-0.7
+0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.3
+0.7
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.1
-0.4
+0.3
N.D.
growth on ypd
YPD
-0.0
+0.1
-0.3
+0.1
N.D.
auxotrophy
YNB Glucose
+0.1
-0.3
-0.2
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.2
-0.4
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.0
+0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.3
-0.2
+0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.1
-0.1
+0.4
N.D.
growth on oleic acid
YNB Glucose
+0.1
+0.2
-0.1
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.3
-0.1
-0.1
+0.3
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
+0.1
+0.1
+0.2
N.D.
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