Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11728 and 11729 are separated by 420 nucleotides11729 and 11730 are separated by 389 nucleotides11730 and 11731 are separated by 205 nucleotides11731 and 11732 are separated by 74 nucleotides mRNA_3360: 11728 - KOG4836 Uncharacterized conserved protein, at 493,196 to 494,520 11728 mRNA_3361: 11729 - K11247 SH3GL endophilin-A, at 494,941 to 495,602 11729 mRNA_3362: 11730 - BLAST vacuolar assembly/sorting protein DID2 [Moesziomyces ..., at 495,992 to 499,759 11730 mRNA_3363: 11731 - K02871 RP-L13, MRPL13, rplM large subunit ribosomal protein L13, at 499,965 to 500,841 11731 mRNA_3364: 11732 - K15423 PPP4C serine/threonine-protein phosphatase 4 catalytic subunit, at 500,916 to 502,448 11732
Group Condition mRNA_3360 mRNA_3361 mRNA_3362 mRNA_3363 mRNA_3364
11728 11729 11730 11731 11732
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.0 -0.1 N.D. -3.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.7 -0.1 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.9 -0.7 N.D. +0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.8 +0.1 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 -0.1 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 +0.4 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.6 -0.1 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.9 +0.0 N.D. +0.8
growth on ypd YPD +0.1 -0.3 +0.1 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.7 -0.3 N.D. -0.4
growth on oleic acid YNB Oleic Acid -0.1 -0.1 +0.3 N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 +0.3 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.7 +0.3 N.D. +0.6
growth on oleic acid YNB Glucose +0.2 -0.1 +0.1 N.D. -0.2
auxotrophy Dropout Complete -0.4 -0.4 +0.4 N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.2 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 -0.1 N.D. +0.3
auxotrophy YNB Glucose -0.3 -0.2 +0.3 N.D. +0.5
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.2 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.4 +0.1 N.D. +1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 +0.0 N.D. +1.3
remove
mRNA_3360
plot
remove
mRNA_3361
plot
remove
mRNA_3362
remove
mRNA_3363
plot
remove
mRNA_3364
plot