Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11729 and 11730 are separated by 389 nucleotides11730 and 11731 are separated by 205 nucleotides11731 and 11732 are separated by 74 nucleotides11732 and 11733 are separated by 1048 nucleotides mRNA_3361: 11729 - K11247 SH3GL endophilin-A, at 494,941 to 495,602 11729 mRNA_3362: 11730 - BLAST vacuolar assembly/sorting protein DID2 [Moesziomyces ..., at 495,992 to 499,759 11730 mRNA_3363: 11731 - K02871 RP-L13, MRPL13, rplM large subunit ribosomal protein L13, at 499,965 to 500,841 11731 mRNA_3364: 11732 - K15423 PPP4C serine/threonine-protein phosphatase 4 catalytic subunit, at 500,916 to 502,448 11732 mRNA_3365: 11733 - Hypothetical Protein, at 503,497 to 504,156 11733
Group Condition mRNA_3361 mRNA_3362 mRNA_3363 mRNA_3364 mRNA_3365
11729 11730 11731 11732 11733
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 N.D. -3.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.7 N.D. +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.1 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 +0.1 N.D. -0.2 N.D.
growth on ypd YPD -0.3 +0.1 N.D. -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.4 N.D. -0.7 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.1 N.D. +0.4 N.D.
growth on oleic acid YNB Glucose -0.1 +0.1 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 +0.0 N.D. +0.8 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.3 N.D. -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.3 N.D. +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.3 N.D. -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.7 +0.3 N.D. +0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 N.D. +0.3 N.D.
auxotrophy Dropout Complete -0.4 +0.4 N.D. +0.5 N.D.
auxotrophy YNB Glucose -0.2 +0.3 N.D. +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.1 N.D. +1.0 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.2 N.D. +0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.0 N.D. +1.3 N.D.
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