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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11730 and 11731 are separated by 205 nucleotides
11731 and 11732 are separated by 74 nucleotides
11732 and 11733 are separated by 1048 nucleotides
11733 and 11734 overlap by 6 nucleotides
mRNA_3362: 11730 - BLAST vacuolar assembly/sorting protein DID2 [Moesziomyces ..., at 495,992 to 499,759
11730
mRNA_3363: 11731 - K02871 RP-L13, MRPL13, rplM large subunit ribosomal protein L13, at 499,965 to 500,841
11731
mRNA_3364: 11732 - K15423 PPP4C serine/threonine-protein phosphatase 4 catalytic subunit, at 500,916 to 502,448
11732
mRNA_3365: 11733 - Hypothetical Protein, at 503,497 to 504,156
11733
mRNA_3366: 11734 - Hypothetical Protein, at 504,151 to 506,017
11734
Group
Condition
mRNA
_3362
mRNA
_3363
mRNA
_3364
mRNA
_3365
mRNA
_3366
11730
11731
11732
11733
11734
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
-3.0
N.D.
-0.2
growth on oleic acid
YNB Glucose
+0.1
N.D.
-0.2
N.D.
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
-0.4
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
+0.3
N.D.
-0.4
N.D.
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
-0.2
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.2
N.D.
-0.0
growth on ypd
YPD
+0.1
N.D.
-0.3
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
N.D.
-0.7
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
N.D.
+0.6
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
-0.2
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.3
N.D.
+0.1
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.4
N.D.
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
+0.3
N.D.
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
+0.3
N.D.
+0.2
auxotrophy
YNB Glucose
+0.3
N.D.
+0.5
N.D.
-0.2
auxotrophy
Dropout Complete
+0.4
N.D.
+0.5
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
+0.6
N.D.
-0.2
growth on ricinoleic acid
YNB Glucose
+0.2
N.D.
+0.4
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
N.D.
+0.8
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
+1.0
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
N.D.
+1.3
N.D.
+0.1
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