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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11735 and 11736 are separated by 845 nucleotides
11736 and 11737 are separated by 610 nucleotides
11737 and 11738 are separated by 650 nucleotides
11738 and 11739 are separated by 911 nucleotides
mRNA_3367: 11735 - Hypothetical Protein, at 506,446 to 507,688
11735
mRNA_3368: 11736 - Hypothetical Protein, at 508,534 to 511,308
11736
mRNA_3369: 11737 - KOG2659 LisH motif-containing protein, at 511,919 to 513,281
11737
mRNA_3370: 11738 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 513,932 to 515,418
11738
mRNA_3371: 11739 - K13806 DAGL sn1-specific diacylglycerol lipase, at 516,330 to 521,387
11739
Group
Condition
mRNA
_3367
mRNA
_3368
mRNA
_3369
mRNA
_3370
mRNA
_3371
11735
11736
11737
11738
11739
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.4
-1.1
+0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.5
-0.5
-0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
-1.1
+0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.0
-0.5
-0.1
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.3
-0.3
+0.0
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
-0.2
-0.5
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-1.5
+0.4
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.6
-0.2
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
-0.3
+0.4
-0.0
growth on ypd
YPD
N.D.
-0.2
+0.1
-0.2
-0.1
growth on oleic acid
YNB Glucose
N.D.
-0.1
+0.1
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
+0.4
-0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.3
-0.0
-0.1
-0.3
auxotrophy
YNB Glucose
N.D.
+0.2
+0.3
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.2
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
-0.1
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.4
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
+0.1
+0.0
+0.0
auxotrophy
Dropout Complete
N.D.
+0.4
+0.4
-0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
+0.0
+0.1
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.4
+0.2
+0.2
+0.1
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